59 citations · 119 across the 12 of their papers we have counts for
12 papers
From toroids to helical tubules: Kirigami-inspired programmable assembly of two-periodic curved crystals
Mason Price, Daichi Hayakawa, Thomas E. Videbæk +6
Biology is full of intricate molecular structures whose geometries are inextricably linked to their function. Many of these structures exhibit varying curvature, such as the helica…
Modular programming of interaction and geometric specificity enables assembly of complex DNA origami nanostructures
Rupam Saha, Daichi Hayakawa, Thomas E. Videbaek +8
We present a modular DNA origami design approach to address the challenges of assembling geometrically complex nanoscale structures, including those with nonuniform Gaussian curvat…
Measuring multisubunit mechanics of geometrically-programmed colloidal assemblies via cryo-EM multi-body refinement
Thomas E. Videbæk, Daichi Hayakawa, Michael F. Hagan +3
Programmable self-assembly has recently enabled the creation of complex structures through precise control of the interparticle interactions and the particle geometries. Targeting…
The polyhedral structure underlying programmable self-assembly
Maximilian C. Hübl, Thomas E. Videbæk, Daichi Hayakawa +2
Experiments have reached a monumental capacity for designing and synthesizing microscopic particles for self-assembly, making it possible to precisely control particle concentratio…
Economical and versatile subunit design principles for self-assembled DNA origami structures
Wei-Shao Wei, Thomas E. Videbæk, Daichi Hayakawa +3
Self-assembly of nanoscale synthetic subunits is a promising bottom-up strategy for fabrication of functional materials. Here, we introduce a design principle for DNA origami nanop…
Magic sizes enable minimal-complexity, high-fidelity assembly of programmable shells
Botond Tyukodi, Fernando Caballero, Daichi Hayakawa +4
Recent advances in synthetic methods enable designing subunits that self-assemble into structures with precise, finite sizes and well-defined architectures, but yields are frequent…
Theoretical Analysis of Hierarchical Language Recognition and Generation by Transformers without Positional Encoding
Daichi Hayakawa, Issei Sato
In this study, we provide constructive proof that Transformers can recognize and generate hierarchical language efficiently with respect to model size, even without the need for a…
A method for site-specifically tethering the enzyme urease to DNA origami with sustained activity
Ian Murphy, Keren Bobilev, Daichi Hayakawa +6
Attaching enzymes to nanostructures has proven useful to the study of enzyme functionality under controlled conditions and has led to new technologies. Often, the utility and inter…
Symmetry-guided inverse design of self-assembling multiscale DNA origami tilings
Daichi Hayakawa, Thomas E. Videbæk, Gregory M. Grason +1
Recent advances enable the creation of nanoscale building blocks with complex geometries and interaction specificities for self-assembly. This nearly boundless design space necessi…
Economical routes to size-specific assembly of self-closing structures
Thomas E. Videbæk, Daichi Hayakawa, Gregory M. Grason +3
Self-assembly is one of the prevalent strategies used by living systems to fabricate ensembles of precision nanometer-scale structures and devices. The push for analogous approache…
Geometrically programmed self-limited assembly of tubules using DNA origami colloids
Daichi Hayakawa, Thomas E. Videbæk, Douglas M. Hall +8
Self-assembly is one of the most promising strategies for making functional materials at the nanoscale, yet new design principles for making self-limiting architectures, rather tha…
Tiling a tubule: How increasing complexity improves the yield of self-limited assembly
Thomas E. Videbæk, Huang Fang, Daichi Hayakawa +3
The ability to design and synthesize ever more complicated colloidal particles opens the possibility of self-assembling a zoo of complex structures, including those with one or mor…