1.2k citations · 2.7k across the 18 of their papers we have counts for
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math.OC2013
MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics
Jose A Egea, David Henriques, Thomas Cokelaer +3
Optimization is key to solve many problems in computational biology. Global optimization methods provide a robust methodology, and metaheuristics in particular have proven to be th…
q-bio.MN2013★ 5 cited
SBML Qualitative Models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
Claudine Chaouiya, Duncan Berenguier, Sarah M Keating +21
Background: Qualitative frameworks, especially those based on the logical discrete formalism, are increasingly used to model regulatory and signalling networks. A major advantage o…