activity
20242026
most citedmpbn: a simple tool for efficient edition and analysis of elementary properties of Boolean networks

1 citations · 1 across the 8 of their papers we have counts for

collaborators

10 papers

cs.LO2026

Walk-In Multi-Stage Patient Flow Scheduling: An ASP Model with DES-Based Evaluation

Ngoc-Mai Pham, Trang-Linh Nguyen, Thi-Hai-Yen Vuong +2

An effective examination and test schedule for patients plays a crucial role in hospital resource management. In this work, we formulate a new reactive patient-flow scheduling prob…

cs.LO2026

BAss: Symbolic Reasoning in Abstract Dialectical Frameworks

Samuel Pastva, Van-Giang Trinh

We present BAss (BDD-based ADF symbolic solver), a novel analysis tool for Abstract Dialectical Frameworks (ADFs) based on Binary Decision Diagrams (BDDs). It supports the fully sy…

q-bio.MN2026

Relating biomarkers and phenotypes using dynamical trap spaces

Samuel Pastva, Kyu Hyong Park, Jordan C. Rozum +2

Connecting the dynamics of biomolecular networks to experimentally measurable cell phenotypes remains a central challenge in systems biology. Here we introduce a model-based defini…

cs.LO2026

On the Trap Space Semantics of Normal Logic Programs

Van-Giang Trinh, Sylvain Soliman, François Fages +1

The logical semantics of normal logic programs has traditionally been based on the notions of Clark's completion and two-valued or three-valued canonical models, including supporte…

cs.LO2025

Scalable Counting of Minimal Trap Spaces and Fixed Points in Boolean Networks

Mohimenul Kabir, Van-Giang Trinh, Samuel Pastva +1

Boolean Networks (BNs) serve as a fundamental modeling framework for capturing complex dynamical systems across various domains, including systems biology, computational logic, and…

cs.LO2025

On the Boolean Network Theory of Datalog

Van-Giang Trinh, Belaid Benhamou, Sylvain Soliman +1

Datalog is a central formalism used in a variety of domains ranging from deductive databases and abstract argumentation frameworks to answer set programming. Its model theor…

cs.DM2025

On the number of asynchronous attractors in AND-NOT Boolean networks

Van-Giang Trinh, Samuel Pastva, Jordan Rozum +2

Boolean Networks (BNs) describe the time evolution of binary states using logic functions on the nodes of a network. They are fundamental models for complex discrete dynamical syst…

cs.LO2025

Graphical Conditions for the Existence, Unicity and Number of Regular Models

Van-Giang Trinh, Belaid Benhamou, Sylvain Soliman +1

The regular models of a normal logic program are a particular type of partial (i.e. 3-valued) models which correspond to stable partial models with minimal undefinedness. In this p…

cs.LO2024

Static Analysis of Logic Programs via Boolean Networks

Van-Giang Trinh, Belaid Benhamou

Answer Set Programming (ASP) is a declarative problem solving paradigm that can be used to encode a combinatorial problem as a logic program whose stable models correspond to the s…

cs.LO2024★ 1 cited

mpbn: a simple tool for efficient edition and analysis of elementary properties of Boolean networks

Van-Giang Trinh, Belaid Benhamou, Loïc Paulevé

The tool mpbn offers a Python programming interface for an easy interactive editing of Boolean networks and the efficient computation of elementary properties of their dynamics, in…