4 papers · 1 filter
Missing-Modality-Aware Graph Neural Network for Cancer Classification
Sina Tabakhi, Chen, Haiping Lu
A key challenge in learning from multimodal biological data is missing modalities, where data from one or more modalities are absent for some patients. Existing approaches either e…
Classifying the Stoichiometry of Virus-like Particles with Interpretable Machine Learning
Jiayang Zhang, Xianyuan Liu, Wei Wu +6
Virus-like particles (VLPs) are valuable for vaccine development due to their immune-triggering properties. Understanding their stoichiometry, the number of protein subunits to for…
Co-Evolution-Based Metal-Binding Residue Prediction with Graph Neural Networks
Sayedmohammadreza Rastegari, Sina Tabakhi, Xianyuan Liu +3
Understanding protein-metal interactions is central to structural biology, with metal ions being vital for catalysis, stability, and signal transduction. Predicting metal-binding r…
Heterogeneous graph attention network improves cancer multiomics integration
Sina Tabakhi, Charlotte Vandermeulen, Ian Sudbery +1
The increase in high-dimensional multiomics data demands advanced integration models to capture the complexity of human diseases. Graph-based deep learning integration models, desp…