4 papers · 1 filter
A full software stack for epidemic disease management: Unlocking the joint potential of software technology and supercomputing
Jonas Gilg, Johann Fredrik Jadebeck, Mariama Jaiteh +22
Infectious diseases remain a major threat to human societies. During the recent COVID-19 pandemic, mathematical modeling and extensive computer simulations proved highly effective…
Simulation-based inference for rapid Bayesian parameter estimation in epidemiological models: a comparison with MCMC
Alina Bazarova, Johann Fredrik Jadebeck, Henrik Zunker +5
Mechanistic epidemiological models are widely used to support infectious disease forecasting and public-health decision making. Bayesian calibration of such models is commonly perf…
Efficient numerical computation of traveler states in explicit mobility-based metapopulation models: Mathematical theory and application to epidemics
Henrik Zunker, René Schmieding, Jan Hasenauer +1
Metapopulation models are powerful tools for capturing the spatio-temporal spread of infectious diseases. Models that explicitly account for traveler origins and destinations, such…
MEmilio -- A high performance Modular EpideMIcs simuLatIOn software for multi-scale and comparative simulations of infectious disease dynamics
Julia Bicker, Carlotta Gerstein, David Kerkmann +33
Epidemic and pandemic preparedness with rapid outbreak response rely on timely, trustworthy evidence. Mathematical models are crucial for supporting timely and reliable evidence ge…