most citedEquivariant Spherical Transformer for Efficient Molecular Modeling

1 citations · 3 across the 12 of their papers we have counts for

collaborators

13 papers

cs.LG2026

Monkey King Bang: A Unified Scientific Multimodal Foundation Model

Hesen Chen, Xinyu Su, Xiaomeng Yang +11

Scientific discovery is increasingly shifting from isolated disciplines to multi-domain reasoning, and AI for science faces a similar transition. Existing systems are either specia…

cs.LG2026

Nested Spatio-Temporal Time Series Forecasting

Yinghao Ai, Yukai Zhou, Ruoxi Jiang +8

Spatiotemporal forecasting is critical for real-world applications like traffic management, yet capturing reliable interactions remains challenging under noisy and non-stationary c…

cs.LG2026

FLAG: Foundation model representation with Latent diffusion Alignment via Graph for spatial gene expression prediction

Qi Si, Penglei Wang, Yushuai Wu +5

Predicting spatial gene expression from routine H\&E enables large-scale molecular profiling, yet current models treat this as isolated pointwise tasks, thereby overlooking essenti…

physics.chem-ph2026★ 1 cited

Suiren-1.0 Technical Report: A Family of Molecular Foundation Models

Junyi An, Xinyu Lu, Yun-Fei Shi +5

We introduce Suiren-1.0, a family of molecular foundation models for the accurate modeling of diverse organic systems. Suiren-1.0 comprising three specialized variants (Suiren-Base…

cs.LG2026

Equivariant Asynchronous Diffusion: An Adaptive Denoising Schedule for Accelerated Molecular Conformation Generation

Junyi An, Chao Qu, Yun-Fei Shi +3

Recent 3D molecular generation methods primarily use asynchronous auto-regressive or synchronous diffusion models. While auto-regressive models build molecules sequentially, they'r…

cs.CV2026

PET-F2I: A Comprehensive Benchmark and Parameter-Efficient Fine-Tuning of LLMs for PET/CT Report Impression Generation

Yuchen Liu, Wenbo Zhang, Liling Peng +6

PET/CT imaging is pivotal in oncology and nuclear medicine, yet summarizing complex findings into precise diagnostic impressions is labor-intensive. While LLMs have shown promise i…

cs.LG2026★ 1 cited

A Pre-trained Reaction Embedding Descriptor Capturing Bond Transformation Patterns

Weiqi Liu, Fenglei Cao, Yuan Qi +1

With the rise of data-driven reaction prediction models, effective reaction descriptors are crucial for bridging the gap between real-world chemistry and digital representations. H…

cs.AI2025

Constraints-Guided Diffusion Reasoner for Neuro-Symbolic Learning

Xuan Zhang, Zhijian Zhou, Weidi Xu +3

Enabling neural networks to learn complex logical constraints and fulfill symbolic reasoning is a critical challenge. Bridging this gap often requires guiding the neural network's…

cs.LG2025

Guiding Diffusion Models with Reinforcement Learning for Stable Molecule Generation

Zhijian Zhou, Junyi An, Zongkai Liu +5

Generating physically realistic 3D molecular structures remains a core challenge in molecular generative modeling. While diffusion models equipped with equivariant neural networks…

cs.LG2025★ 1 cited

Equivariant Spherical Transformer for Efficient Molecular Modeling

Junyi An, Xinyu Lu, Chao Qu +6

Equivariant Graph Neural Networks (GNNs) have significantly advanced the modeling of 3D molecular structure by leveraging group representations. However, their message passing, hea…

cs.LG2025

ChemAmp: Amplified Chemistry Tools via Composable Agents

Zhucong Li, Powei Chang, Jin Xiao +6

Although LLM-based agents are proven to master tool orchestration in scientific fields, particularly chemistry, their single-task performance remains limited by underlying tool con…

cs.LG2025

Equivariant Masked Position Prediction for Efficient Molecular Representation

Junyi An, Chao Qu, Yun-Fei Shi +4

Graph neural networks (GNNs) have shown considerable promise in computational chemistry. However, the limited availability of molecular data raises concerns regarding GNNs' ability…

cs.CE2025

ChemHTS: Hierarchical Tool Stacking for Enhancing Chemical Agents

Zhucong Li, Jin Xiao, Bowei Zhang +5

Large Language Models (LLMs) have demonstrated remarkable potential in scientific research, particularly in chemistry-related tasks such as molecular design, reaction prediction, a…