10 citations · 22 across the 12 of their papers we have counts for
6 papers · 1 filter
Flow-Matching-Based Protein Structure Tokenizer Made Efficient and Easy
Zhe Zhang, Yikai Zhang, Jiangtao Feng +3
As the bridge between protein modality and discrete modeling, protein structure tokenization still largely relies on heavily engineered training objectives tailored to specific dow…
Enhancing LLM Metacognition via Cognitive Pairwise Training
Weitao Li, Hao Zhou, Xuanyu Lei +11
Reinforcement learning with verifiable rewards (RLVR) has become central to LLM reasoning, but its outcome-level rewards can make models more willing to give confident answers when…
ShortListing Model: A Streamlined SimplexDiffusion for Discrete Variable Generation
Yuxuan Song, Zhe Zhang, Yu Pei +7
Generative modeling of discrete variables is challenging yet crucial for applications in natural language processing and biological sequence design. We introduce the Shortlisting M…
A Periodic Bayesian Flow for Material Generation
Hanlin Wu, Yuxuan Song, Jingjing Gong +6
Generative modeling of crystal data distribution is an important yet challenging task due to the unique periodic physical symmetry of crystals. Diffusion-based methods have shown e…
Equivariant Flow Matching with Hybrid Probability Transport
Yuxuan Song, Jingjing Gong, Minkai Xu +5
The generation of 3D molecules requires simultaneously deciding the categorical features~(atom types) and continuous features~(atom coordinates). Deep generative models, especially…
RetroDiff: Retrosynthesis as Multi-stage Distribution Interpolation
Yiming Wang, Yuxuan Song, Yiqun Wang +4
Retrosynthesis poses a key challenge in biopharmaceuticals, aiding chemists in finding appropriate reactant molecules for given product molecules. With reactants and products repre…