6 citations · 13 across the 6 of their papers we have counts for
8 papers
Embedding protein 3D-structures in a cubic lattice. I. The basic algorithms
Jacques Gabarro-Arpa
Realistic 3D-conformations of protein structures can be embedded in a cubic lattice using exclusively integer numbers, additions, subtractions and boolean operations.
A Combinatorial Enumeration of Distances for Calculating Energy in Molecular Conformational Space
Jacques Gabarro-Arpa
In previous works it was shown that protein 3D-conformations could be encoded into discrete sequences called dominance partition sequences (DPS), that generated a linear partition…
A Central Partition of Molecular Conformational Space. V. The Hypergraph of 3D Partition Sequences
Jacques Gabarro-Arpa
In a previous work a procedure was decribed for dividing the -dimensional conformational space of a molecular system into a number of discrete cells, this partition all…
Heuristic decomposition of cones in molecular conformational space
Jacques Gabarro-Arpa
In a previous work arXiv:physics/0611108v2, it was shown that the volume spanned by a molecular system in its conformational space can be effectively bounded by a polyhedral cone,…
A Central Partition of Molecular Conformational Space.III. Combinatorial Determination of the Volume Spanned by a Molecular System
Jacques Gabarro-Arpa
In the first work of this series [physics/0204035] it was shown that the conformational space of a molecule could be described to a fair degree of accuracy by means of a central hy…
A central partition of molecular conformational space. II. Embedding 3D structures
Jacques Gabarro-Arpa
A combinatorial model of molecular conformational space that was previously developped (J. Gabarro-Arpa, Comp. Biol. and Chem. 27, (2003) 153-159), had the drawback that structures…