2 citations · 3 across the 5 of their papers we have counts for
6 papers
PUMA: Learning a Mutation-Aware Vocabulary of Protein Units
Burak Suyunu, Özdeniz Dolu, Ibukunoluwa Abigail Olaosebikan +2
Modeling protein sequences as a language has made language models a powerful tool in computational biology, yet the language itself remains poorly understood. A key step toward und…
PEAK: Explainable Privacy Assistant through Automated Knowledge Extraction
Gonul Ayci, Arzucan Özgür, Murat Şensoy +1
In the realm of online privacy, privacy assistants play a pivotal role in empowering users to manage their privacy effectively. Although recent studies have shown promising progres…
Uncertainty-aware Personal Assistant for Making Personalized Privacy Decisions
Gonul Ayci, Murat Sensoy, Arzucan Özgür +1
Many software systems, such as online social networks enable users to share information about themselves. While the action of sharing is simple, it requires an elaborate thought pr…
DebiasedDTA: A Framework for Improving the Generalizability of Drug-Target Affinity Prediction Models
Rıza Özçelik, Alperen Bağ, Berk Atıl +3
Computational models that accurately predict the binding affinity of an input protein-chemical pair can accelerate drug discovery studies. These models are trained on available pro…
The RELX Dataset and Matching the Multilingual Blanks for Cross-Lingual Relation Classification
Abdullatif Köksal, Arzucan Özgür
Relation classification is one of the key topics in information extraction, which can be used to construct knowledge bases or to provide useful information for question answering.…
Co-occurrence Network of Reuters News
Arzucan Ozgur, Burak Cetin, Haluk Bingol
Networks describe various complex natural systems including social systems. We investigate the social network of co-occurrence in Reuters-21578 corpus, which consists of news artic…