9 citations · 42 across the 15 of their papers we have counts for
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q-bio.GN2009
Expectation-Maximization (EM) Algorithms for Mapping Short Reads Illustrated with FAIRE data and the TP53-WRAP53 Gene Region
Peter J. Waddell, Timothy Herston
Huge numbers of short reads are being generated for mapping back to the genome to discover the frequency of transcripts, miRNAs, DNAase hypersensitive sites, FAIRE regions, nucleos…
q-bio.PE2009★ 4 cited
Resampling Residuals: Robust Estimators of Error and Fit for Evolutionary Trees and Phylogenomics
Peter J. Waddell, Ariful Azad
Phylogenomics, even more so than traditional phylogenetics, needs to represent the uncertainty in evolutionary trees due to systematic error. Here we illustrate the analysis of gen…