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cs.LG2024★ 11 cited
Benchmarking Transcriptomics Foundation Models for Perturbation Analysis : one PCA still rules them all
Ihab Bendidi, Shawn Whitfield, Kian Kenyon-Dean +4
Understanding the relationships among genes, compounds, and their interactions in living organisms remains limited due to technological constraints and the complexity of biological…
cs.LG2024
Automated Discovery of Pairwise Interactions from Unstructured Data
Zuheng, Xu, Moksh Jain +5
Pairwise interactions between perturbations to a system can provide evidence for the causal dependencies of the underlying underlying mechanisms of a system. When observations are…