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cs.LG2025★ 1 cited
Hierarchical Multi-Label Contrastive Learning for Protein-Protein Interaction Prediction Across Organisms
Shiyi Liu, Buwen Liang, Yuetong Fang +2
Recent advances in AI for science have highlighted the power of contrastive learning in bridging heterogeneous biological data modalities. Building on this paradigm, we propose HIP…
q-bio.BM2025
AnnoDPO: Protein Functional Annotation Learning with Direct Preference Optimization
Zixuan Jiang, Renjing Xu
Deciphering protein function remains a fundamental challenge in protein representation learning. The task presents significant difficulties for protein language models (PLMs) due t…