Unsupervised detection and fitness estimation of emerging SARS-CoV-2 variants. Application to wastewater samples (ANRS0160)

Alexandra Lefebvre, Vincent Maréchal, Arnaud Gloaguen +3

Repeated waves of emerging variants during the SARS-CoV-2 pandemics have highlighted the urge of collecting longitudinal genomic data and developing statistical methods based on ti…