activity
20232026
most citedCodonMPNN for Organism Specific and Codon Optimal Inverse Folding

1 citations · 1 across the 6 of their papers we have counts for

collaborators

6 papers

physics.flu-dyn2026

Rotational equivariance and locality in data-driven subgrid-scale closures

Ryley McConkey, Julia Balla, Elyssa Hofgard +2

Data-driven subgrid-scale closures for large eddy simulation are of significant interest in many engineering and geoscience applications. In this context, several important questio…

physics.flu-dyn2026

Turbulence teaches equivariance to neural networks

Ryley McConkey, Julia Balla, Jeremiah Bailey +5

We show that the rotational nature of turbulence affects how neural networks learn mappings between quantities governed by the Navier-Stokes equations. We train super-resolution mo…

physics.flu-dyn2025

Implicit Augmentation from Distributional Symmetry in Turbulence Super-Resolution

Julia Balla, Jeremiah Bailey, Ali Backour +4

The immense computational cost of simulating turbulence has motivated the use of machine learning approaches for super-resolving turbulent flows. A central challenge is ensuring th…

cs.LG2024

A Cosmic-Scale Benchmark for Symmetry-Preserving Data Processing

Julia Balla, Siddharth Mishra-Sharma, Carolina Cuesta-Lazaro +2

Efficiently processing structured point cloud data while preserving multiscale information is a key challenge across domains, from graphics to atomistic modeling. Using a curated d…

cs.LG2024★ 1 cited

CodonMPNN for Organism Specific and Codon Optimal Inverse Folding

Hannes Stark, Umesh Padia, Julia Balla +2

Generating protein sequences conditioned on protein structures is an impactful technique for protein engineering. When synthesizing engineered proteins, they are commonly translate…

cs.LG2023

Over-Squashing in Riemannian Graph Neural Networks

Julia Balla

Most graph neural networks (GNNs) are prone to the phenomenon of over-squashing in which node features become insensitive to information from distant nodes in the graph. Recent wor…