activity
20232026
most citedPepHarmony: A Multi-View Contrastive Learning Framework for Integrated Sequence and Structure-Based Peptide Encoding

3 citations · 7 across the 13 of their papers we have counts for

collaborators

13 papers

cs.LG2026

CliffRank: A Dual-Branch Framework for Activity-Cliff Ranking Prediction

Kewei Li, Rongying Zhang, Peiyu Yang +4

Activity-cliff ranking remains difficult because local structural changes can cause large activity differences, while high-quality data that resolve the underlying mechanisms remai…

cs.AI2026

FLaG: Frequency-Domain Latent-attention Gated Pooling for Token Aggregation

Kewei Li, Rongying Zhang, Xueli Wang +6

Token aggregation converts token-level representations into fixed-dimensional sample representations, but most pooling methods operate only in the original token space. We introduc…

cs.LG2026

DISTAL: Distillation and Self-Supervised Pretraining for Structure-Agnostic Materials Property Prediction

Weiran Wang, Xintong Huo, Yueying Wang +7

Materials property prediction remains difficult in low-data settings, where many target properties are supported by only a limited number of labeled samples. Models with the strong…

cs.CV2026

CMCNet: Aligning Ultrasound Image Embeddings with Textual TI-RADS Representations for Fine-Grained Thyroid Classification

Bingxin Yu, Xueli Wang, Jerry Zhou +6

Ultrasound is the primary imaging modality for assessing thyroid nodules, and the ACR TI-RADS framework standardizes diagnosis through five ultrasound feature categories that are a…

cs.LG2026

Frequency-Domain Latent Attention Gating for Cross-Domain Token Aggregation

Kewei Li, Rongying Zhang, Xueli Wang +5

Token aggregation is a common bottleneck in models that map token representations to sample-level predictions, yet most pooling methods operate only in the original token domain. W…

cs.CE2025

GrifFinNet: A Graph-Relation Integrated Transformer for Financial Predictions

Chenlanhui Dai, Wenyan Wang, Yusi Fan +4

Predicting stock returns remains a central challenge in quantitative finance, transitioning from traditional statistical methods to contemporary deep learning techniques. However,…

cs.LG2025

A transformer-BiGRU-based framework with data augmentation and confident learning for network intrusion detection

Jiale Zhang, Pengfei He, Fei Li +5

In today's fast-paced digital communication, the surge in network traffic data and frequency demands robust and precise network intrusion solutions. Conventional machine learning m…

cs.LG2025

DeepSelective: Interpretable Prognosis Prediction via Feature Selection and Compression in EHR Data

Ruochi Zhang, Qian Yang, Xiaoyang Wang +10

The rapid accumulation of Electronic Health Records (EHRs) has transformed healthcare by providing valuable data that enhance clinical predictions and diagnoses. While conventional…

cs.CL2025

Information Entropy Invariance: Enhancing Length Extrapolation in Attention Mechanisms

Kewei Li, Yanwen Kong, Yiping Xu +4

Since the emergence of research on improving the length extrapolation capabilities of large language models in 2021, some studies have made modifications to the scaling factor in t…

cs.LG2024★ 1 cited

TemporalPaD: a reinforcement-learning framework for temporal feature representation and dimension reduction

Xuechen Mu, Zhenyu Huang, Kewei Li +5

Recent advancements in feature representation and dimension reduction have highlighted their crucial role in enhancing the efficacy of predictive modeling. This work introduces Tem…

q-bio.BM2024★ 1 cited

AMPCliff: quantitative definition and benchmarking of activity cliffs in antimicrobial peptides

Kewei Li, Yuqian Wu, Yinheng Li +7

Since the mechanism of action of drug molecules in the human body is difficult to reproduce in the in vitro environment, it becomes difficult to reveal the causes of the activity c…

cs.LG2024★ 3 cited

PepHarmony: A Multi-View Contrastive Learning Framework for Integrated Sequence and Structure-Based Peptide Encoding

Ruochi Zhang, Haoran Wu, Chang Liu +8

Recent advances in protein language models have catalyzed significant progress in peptide sequence representation. Despite extensive exploration in this field, pre-trained models t…

q-bio.BM2023★ 2 cited

PepLand: a large-scale pre-trained peptide representation model for a comprehensive landscape of both canonical and non-canonical amino acids

Ruochi Zhang, Haoran Wu, Yuting Xiu +6

In recent years, the scientific community has become increasingly interested on peptides with non-canonical amino acids due to their superior stability and resistance to proteolyti…