474 citations · 1.4k across the 25 of their papers we have counts for
26 papers
Slowing translation to avoid ribosome population extinction and maintain stable allocation at slow growth rates
Dotan Goberman, Anjan Roy, Rami Pugatch
To double the cellular population of ribosomes, a fraction of the active ribosomes is allocated to synthesize ribosomal proteins. Subsequently, these ribosomal proteins enter the r…
A comparison between D-wave and a classical approximation algorithm and a heuristic for computing the ground state of an Ising spin glass
Ran Yaacoby, Nathan Schaar, Leon Kellerhals +3
Finding the ground state of an Ising-spin glass on general graphs belongs to the class of NP-hard problems, widely believed to have no efficient polynomial-time algorithms for solv…
Transcription-translation machinery -- an autocatalytic network coupling all cellular cycles and generating a plethora of growth laws
Anjan Roy, Dotan Goberman, Rami Pugatch
Recently discovered simple quantitative relations, known as bacterial growth laws, hint on the existence of simple underlying principles at the heart of bacterial growth. In this w…
Approximating Sparse Quadratic Programs
Danny Hermelin, Leon Kellerhals, Rolf Niedermeier +1
Given a matrix , we consider the problem of maximizing subject to the constraint . This problem, called MaxQP by Charikar an…
Lorentzian geometry based analysis of airplane boarding policies highlights slow passengers first as better
Sveinung Erland, Jevgenijs Kaupužs, Vidar Frette +2
We study airplane boarding in the limit of large number of passengers using geometric optics in a Lorentzian metric. The airplane boarding problem is naturally embedded in a 1+1 di…
Ribosome self-assembly leads to overlapping reproduction cycles and increases growth rate
Rami Pugatch, Yinon M. Bar-on
In permissive environments, E. coli can double its dry mass every 21 minutes. During this time, ribosomes, RNA polymerases, and the proteome are all doubled. Yet, the question of h…