activity
20232026
most citedMolecule Design by Latent Prompt Transformer

1 citations · 2 across the 7 of their papers we have counts for

collaborators

7 papers

cs.CL2026

Inference-Time Rethinking with Latent Thought Vectors for Math Reasoning

Deqian Kong, Minglu Zhao, Aoyang Qin +10

Standard chain-of-thought reasoning generates a solution in a single forward pass, committing irrevocably to each token and lacking a mechanism to recover from early errors. We int…

cs.CL2025★ 1 cited

Latent Thought Models with Variational Bayes Inference-Time Computation

Deqian Kong, Minglu Zhao, Dehong Xu +8

We propose a novel class of language models, Latent Thought Models (LTMs), which incorporate explicit latent thought vectors that follow an explicit prior model in latent space. Th…

cs.CL2025

Better Prompt Compression Without Multi-Layer Perceptrons

Edouardo Honig, Andrew Lizarraga, Zijun Frank Zhang +1

Prompt compression is a promising approach to speeding up language model inference without altering the generative model. Prior works compress prompts into smaller sequences of lea…

q-bio.CB2024

Long-range gene expression prediction with token alignment of large language model

Edouardo Honig, Huixin Zhan, Ying Nian Wu +1

Gene expression is a cellular process that plays a fundamental role in human phenotypical variations and diseases. Despite advances of deep learning models for gene expression pred…

cs.LG2024★ 1 cited

Molecule Design by Latent Prompt Transformer

Deqian Kong, Yuhao Huang, Jianwen Xie +8

This work explores the challenging problem of molecule design by framing it as a conditional generative modeling task, where target biological properties or desired chemical constr…

stat.ML2023

Differentiable VQ-VAE's for Robust White Matter Streamline Encodings

Andrew Lizarraga, Brandon Taraku, Edouardo Honig +2

Given the complex geometry of white matter streamlines, Autoencoders have been proposed as a dimension-reduction tool to simplify the analysis streamlines in a low-dimensional late…

cs.LG2023

Molecule Design by Latent Prompt Transformer

Deqian Kong, Yuhao Huang, Jianwen Xie +1

This paper proposes a latent prompt Transformer model for solving challenging optimization problems such as molecule design, where the goal is to find molecules with optimal values…