activity
20082026
most citedLocating a Tree in a Phylogenetic Network in Quadratic Time

34 citations · 91 across the 23 of their papers we have counts for

collaborators

23 papers

q-bio.PE2026

Asymptotic Counting of Binary Phylogenetic Networks

Hao Yu, Louxin Zhang

Phylogenetic networks provide a general framework for modeling reticulate evolutionary processes such as hybridization, recombination, and horizontal gene transfer. In this paper,…

math.CO2023

The tree-child network problem for line trees and the shortest common supersequences for permutations

Laurent Bulteau, Louxin Zhang

One strategy for reconstruction of phylogenetic networks is to solve the phylogenetic network problem, which involves inferring phylogenetic trees first and subsequently computing…

q-bio.PE2023

The k-Robinson-Foulds Dissimilarity Measures for Comparison of Labeled Trees

Elahe Khayatian, Gabriel Valiente, Louxin Zhang

Understanding the mutational history of tumor cells is a critical endeavor in unraveling the mechanisms underlying cancer. Since the modeling of tumor cell evolution employs labele…

q-bio.PE2022

Can Multiple Phylogenetic Trees Be Displayed in a Tree-Child Network Simultaneously?

Yufeng Wu, Louxin Zhang

A binary phylogenetic network on a taxon set is a rooted acyclic digraph in which the degree of each nonleaf node is three and its leaves (i.e.degree-one nodes) are uniquely la…

q-bio.PE2022

Two Results about the Sackin and Colless Indices for Phylogenetic Trees and Their Shapes

Gary Goh, Michael Fuchs, Louxin Zhang

The Sackin and Colless indices are two widely-used metrics for measuring the balance of trees and for testing evolutionary models in phylogenetics. This short paper contributes two…

q-bio.PE2021

The Sackin Index of Simplex Networks

Louxin Zhang

A phylogenetic network is a simplex (or 1-component tree-child) network if the child of every reticulation node is a network leaf. Simplex networks are a superclass of phylogenetic…