most citedGraph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective

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cs.LG2025★ 1 cited

Energy-Based Models for Predicting Mutational Effects on Proteins

Patrick Soga, Zhenyu Lei, Yinhan He +2

Predicting changes in binding free energy () is a vital task in protein engineering and protein-protein interaction (PPI) engineering for drug discovery. Previous works have o…

cs.LG2024★ 1 cited

Graph Neural Networks Are More Than Filters: Revisiting and Benchmarking from A Spectral Perspective

Yushun Dong, Patrick Soga, Yinhan He +2

Graph Neural Networks (GNNs) have achieved remarkable success in various graph-based learning tasks. While their performance is often attributed to the powerful neighborhood aggreg…