28 citations · 48 across the 12 of their papers we have counts for
3 papers · 1 filter
Retracing the Process of Translation: Proteome-wide mapping of stable transcriptomic predictors of protein abundance in cancer cell lines
Johannes Schlüter, Alexander Schönhuth
Understanding the relationship between gene expression and protein abundance is central to molecular and systems biology. While gene expression reflects transcriptional activity, p…
Snowball: Strain aware gene assembly of Metagenomes
I. Gregor, A. Schönhuth, A. C. McHardy
Gene assembly is an important step in functional analysis of shotgun metagenomic data. Nonetheless, strain aware assembly remains a challenging task, as current assembly tools ofte…
Pair HMM based gap statistics for re-evaluation of indels in alignments with affine gap penalties: Extended Version
Alexander Schönhuth, Raheleh Salari, S. Cenk Sahinalp
Although computationally aligning sequence is a crucial step in the vast majority of comparative genomics studies our understanding of alignment biases still needs to be improved.…