112 citations · 255 across the 57 of their papers we have counts for
12 papers · 1 filter
Best Matches in Phylogenetic Networks
Patricia A. Ebert, Peter F. Stadler, Marc Hellmuth
Best match graphs (BMGs) were introduced in mathematical phylogenetics to describe the concept of closest relatives for related genes (leaves of rooted tree) in different organisms…
The weighted total cophenetic index: A novel balance index for phylogenetic networks
Linda Knüver, Mareike Fischer, Marc Hellmuth +1
Phylogenetic networks play an important role in evolutionary biology as, other than phylogenetic trees, they can be used to accommodate reticulate evolutionary events such as horiz…
The Theory of Gene Family Histories
Marc Hellmuth, Peter F. Stadler
Most genes are part of larger families of evolutionary related genes. The history of gene families typically involves duplications and losses of genes as well as horizontal transfe…
Relative Timing Information and Orthology in Evolutionary Scenarios
David Schaller, Tom Hartmann, Manuel Lafond +3
Evolutionary scenarios describing the evolution of a family of genes within a collection of species comprise the mapping of the vertices of a gene tree to vertices and edges of…
Clustering Systems of Phylogenetic Networks
Marc Hellmuth, David Schaller, Peter F. Stadler
Rooted acyclic graphs appear naturally when the phylogenetic relationship of a set of taxa involves not only speciations but also recombination, horizontal transfer, or hybridi…
Least resolved trees for two-colored best match graphs
David Schaller, Manuela Geiß, Marc Hellmuth +1
2-colored best match graphs (2-BMGs) form a subclass of sink-free bi-transitive graphs that appears in phylogenetic combinatorics. There, 2-BMGs describe evolutionarily most closel…