2 papers
cs.GR2024
Pattern or Artifact? Interactively Exploring Embedding Quality with TRACE
Edith Heiter, Liesbet Martens, Ruth Seurinck +4
This paper presents TRACE, a tool to analyze the quality of 2D embeddings generated through dimensionality reduction techniques. Dimensionality reduction methods often prioritize p…
q-bio.CB2024
Unraveling cell-cell communication with NicheNet by inferring active ligands from transcriptomics data
Chananchida Sang-aram, Robin Browaeys, Ruth Seurinck +1
Ligand-receptor interactions constitute a fundamental mechanism of cell-cell communication and signaling. NicheNet is a well-established computational tool that infers ligand-recep…