57 citations · 133 across the 10 of their papers we have counts for
11 papers
JASPR: Joint Spatial Representation learning of histology and spatial genomics for improved virtual genomic screening and clinical prognostication
Marija Pizurica, Eric Zimmermann, Neil Tenenholtz +5
Recent studies have shown that spatial properties of tumors are critical for understanding disease biology and predicting patient outcomes. These spatial properties are increasingl…
Multimodal Alignment Improves Generalizability of Genomic Biomarker Prediction in Computational Pathology
Ekaterina Redekop, Eric Zimmermann, Ava P Amini +5
Computational pathology models that use digitized histopathology whole-slide images have the potential to become a cost-effective and scalable alternative to molecular assays for t…
Mixed Magnification Aggregation for Generalizable Region-Level Representations in Computational Pathology
Eric Zimmermann, Julian Viret, Michal Zelechowski +7
In recent years, a standard computational pathology workflow has emerged where whole slide images are cropped into tiles, these tiles are processed using a foundation model, and ta…
KerJEPA: Kernel Discrepancies for Euclidean Self-Supervised Learning
Eric Zimmermann, Harley Wiltzer, Justin Szeto +2
Breakthroughs in self-supervised Joint-Embedding Predictive Architectures (JEPAs) have established that regularizing Euclidean representations toward isotropic Gaussian priors yiel…
PRISM2: Unlocking Multi-Modal General Pathology AI with Clinical Dialogue
Eugene Vorontsov, George Shaikovski, Adam Casson +16
Recent rapid progress in the field of computational pathology has been enabled by foundation models. These models are beginning to move beyond encoding image patches towards whole-…
Virchow2: Scaling Self-Supervised Mixed Magnification Models in Pathology
Eric Zimmermann, Eugene Vorontsov, Julian Viret +11
Foundation models are rapidly being developed for computational pathology applications. However, it remains an open question which factors are most important for downstream perform…
PRISM: A Multi-Modal Generative Foundation Model for Slide-Level Histopathology
George Shaikovski, Adam Casson, Kristen Severson +19
Foundation models in computational pathology promise to unlock the development of new clinical decision support systems and models for precision medicine. However, there is a misma…
Adapting Self-Supervised Learning for Computational Pathology
Eric Zimmermann, Neil Tenenholtz, James Hall +8
Self-supervised learning (SSL) has emerged as a key technique for training networks that can generalize well to diverse tasks without task-specific supervision. This property makes…
Benchmarking a Benchmark: How Reliable is MS-COCO?
Eric Zimmermann, Justin Szeto, Jerome Pasquero +1
Benchmark datasets are used to profile and compare algorithms across a variety of tasks, ranging from image classification to segmentation, and also play a large role in image pret…
An Empirical Study of Uncertainty in Polygon Annotation and the Impact of Quality Assurance
Eric Zimmermann, Justin Szeto, Frederic Ratle
Polygons are a common annotation format used for quickly annotating objects in instance segmentation tasks. However, many real-world annotation projects request near pixel-perfect…
Virchow: A Million-Slide Digital Pathology Foundation Model
Eugene Vorontsov, Alican Bozkurt, Adam Casson +28
The use of artificial intelligence to enable precision medicine and decision support systems through the analysis of pathology images has the potential to revolutionize the diagnos…