47 citations · 104 across the 10 of their papers we have counts for
4 papers · 1 filter
JUMP-lite: Compact, reproducible benchmarking of cell representations
Alán F. Muñoz, Johan Fredin Haslum, Runxi Shen +2
Image-based profiling captures rich phenotypic signatures for drug discovery and functional genomics. Large public datasets like JUMP Cell Painting now provide millions of images f…
Progress and new challenges in image-based profiling
Erik Serrano, John Peters, Jesko Wagner +19
For over two decades, image-based profiling has revolutionized cell phenotype analysis. Image-based profiling processes rich, high-throughput, microscopy data into thousands of unb…
Cell Painting Gallery: an open resource for image-based profiling
Erin Weisbart, Ankur Kumar, John Arevalo +3
Image-based or morphological profiling is a rapidly expanding field wherein cells are "profiled" by extracting hundreds to thousands of unbiased, quantitative features from images…
Reproducible image-based profiling with Pycytominer
Erik Serrano, Srinivas Niranj Chandrasekaran, Dave Bunten +25
Advances in high-throughput microscopy have enabled the rapid acquisition of large numbers of high-content microscopy images. Whether by deep learning or classical algorithms, imag…