47 citations · 104 across the 10 of their papers we have counts for
3 papers · 2 filters
cubic: CUDA-accelerated 3D Bioimage Computing
Alexandr A. Kalinin, Anne E. Carpenter, Shantanu Singh +1
Quantitative analysis of multidimensional biological images is useful for understanding complex cellular phenotypes and accelerating advances in biomedical research. As modern micr…
Foreground-aware Virtual Staining for Accurate 3D Cell Morphological Profiling
Alexandr A. Kalinin, Paula Llanos, Theresa Maria Sommer +11
Microscopy enables direct observation of cellular morphology in 3D, with transmitted-light methods offering low-cost, minimally invasive imaging and fluorescence microscopy providi…
cp_measure: API-first feature extraction for image-based profiling workflows
Alán F. Muñoz, Tim Treis, Alexandr A. Kalinin +4
Biological image analysis has traditionally focused on measuring specific visual properties of interest for cells or other entities. A complementary paradigm gaining increasing tra…