7 citations · 7 across the 3 of their papers we have counts for
3 papers
q-bio.QM2004
A Statistical Analysis of RNA Folding Algorithms Through Thermodynamic Parameter Perturbation
D. M. Layton, R. Bundschuh
Computational RNA secondary structure prediction is rather well established. However, such prediction algorithms always depend on a large number of experimentally measured paramete…
q-bio.QM2004
Finite Width Model Sequence Comparison
Ralf Bundschuh, Nicholas Chia
Sequence comparison is a widely used computational technique in modern molecular biology. In spite of the frequent use of sequence comparisons the important problem of assigning st…
physics.bio-ph2003★ 7 cited
Analytical description of finite size effects for RNA secondary structures
Tsunglin Liu, Ralf Bundschuh
The ensemble of RNA secondary structures of uniform sequences is studied analytically. We calculate the partition function for very long sequences and discuss how the cross-over le…