activity
20072024
most citedCycle Equivalence of Graph Dynamical Systems

36 citations · 73 across the 20 of their papers we have counts for

collaborators

22 papers

math.HO2024

Revealing the hidden beauty of finite groups with Cayley graphs

Matthew Macauley

Group theory involves the study of symmetry, and its inherent beauty gives it the potential to be one of the most accessible and enjoyable areas of mathematics, for students and no…

math.CO2023

Torsors and tilings from toric toggling

Colin Defant, Michael Joseph, Matthew Macauley +1

Much of dynamical algebraic combinatorics focuses on global dynamical systems defined via maps that are compositions of local toggle operators. The second author and Roby studied s…

q-bio.MN2022

Boolean models of the transport, synthesis, and metabolism of tryptophan in Escherichia Coli

Isadora Deal, Matthew Macauley, Robin Davies

The tryptophan (trp) operon in E. coli codes for the proteins responsible for the synthesis of the amino acid tryptophan from chorismic acid, and has been one of the most well-stud…

q-bio.NC2020

The case for algebraic biology: from research to education

Matthew Macauley, Nora Youngs

Though it goes without saying that linear algebra is fundamental to mathematical biology, polynomial algebra is less visible. In this article, we will give a brief tour of four div…

math.CO2019

Toric heaps, cyclic reducibility, and conjugacy in Coxeter groups

Shih-Wei Chao, Matthew Macauley

As a visualization of Cartier and Foata's "partially commutative monoid" theory, G.X. Viennot introduced "heaps of pieces" in 1986. These are essentially labeled posets satisfying…

q-bio.MN2016★ 1 cited

Synchrony in a Boolean network model of the L-arabinose operon in Escherichia coli

Andy Jenkins, Matthew Macauley

The lactose operon in Escherichia coli was the first known gene regulatory network, and it is frequently used as a prototype for new modeling paradigms. Historically, many of these…