activity
20222026
most citedRAPIDx: High-performance ReRAM Processing in-Memory Accelerator for Sequence Alignment

9 citations · 12 across the 6 of their papers we have counts for

collaborators

6 papers

cs.AR2026

GenDRAM:Hardware-Software Co-Design of General Platform in DRAM

Tsung-Han Lu, Weihong Xu, Tajana Rosing

Dynamic programming (DP) algorithms, such as All-Pairs Shortest Path (APSP) and genomic sequence alignment, are fundamental to many scientific domains but are severely bottlenecked…

cs.AR2025

SLIM: A Heterogeneous Accelerator for Edge Inference of Sparse Large Language Model via Adaptive Thresholding

Weihong Xu, Haein Choi, Po-kai Hsu +2

Large language models (LLMs) have demonstrated exceptional proficiency in understanding and generating human language, but efficient inference on resource-constrained embedded devi…

cs.AR2023★ 2 cited

Proxima: Near-storage Acceleration for Graph-based Approximate Nearest Neighbor Search in 3D NAND

Weihong Xu, Junwei Chen, Po-Kai Hsu +5

Approximate nearest neighbor search (ANNS) plays an indispensable role in a wide variety of applications, including recommendation systems, information retrieval, and semantic sear…

q-bio.QM2023

SpecHD: Hyperdimensional Computing Framework for FPGA-based Mass Spectrometry Clustering

Sumukh Pinge, Weihong Xu, Jaeyoung Kang +4

Mass spectrometry-based proteomics is a key enabler for personalized healthcare, providing a deep dive into the complex protein compositions of biological systems. This technology…

cs.DC2022★ 1 cited

Massively Parallel Open Modification Spectral Library Searching with Hyperdimensional Computing

Jaeyoung Kang, Weihong Xu, Wout Bittremieux +1

Mass spectrometry, commonly used for protein identification, generates a massive number of spectra that need to be matched against a large database. In reality, most of them remain…

cs.AR2022★ 9 cited

RAPIDx: High-performance ReRAM Processing in-Memory Accelerator for Sequence Alignment

Weihong Xu, Saransh Gupta, Niema Moshiri +1

Genome sequence alignment is the core of many biological applications. The advancement of sequencing technologies produces a tremendous amount of data, making sequence alignment a…