activity
20142026
most citedAn end-to-end assembly of the Aedes aegypti genome

3.2k citations · 3.2k across the 14 of their papers we have counts for

collaborators

15 papers

cs.CL2026

Verb-ICL: Rethinking In-Context Learning for Structured Prediction

Fan Bai, Hengshuo Miao, Sanjit S Batra +3

Structured prediction tasks pose unique challenges for in-context learning (ICL): their compositional outputs require modeling fine-grained, token-level patterns that sentence-leve…

cs.CL2026

MedFabric: Gold Evidence Hides the Difficulty of Word-Level Medical Fabrication Detection

Tung Sum Thomas Kwok, Qian Qian, Xiaofeng Lin +8

Large language models fabricate in medicine, producing fluent statements that are factually wrong, so reliable fabrication detection is a prerequisite for clinical deployment. Repo…

cs.CL2026

MedicalBench: Evaluating Large Language Models Toward Improved Medical Concept Extraction

Zhichao Yang, Gregory D. Lyng, Sanjit Singh Batra +1

Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts are frequently impli…

cs.LG2026

Imputation of Unknown Missingness in Sparse Electronic Health Records

Jun Han, Josue Nassar, Sanjit Singh Batra +3

Machine learning holds great promise for advancing the field of medicine, with electronic health records (EHRs) serving as a primary data source. However, EHRs are often sparse and…

cs.LG2026

Fast and Effective On-policy Distillation from Reasoning Prefixes

Dongxu Zhang, Zhichao Yang, Sepehr Janghorbani +6

On-policy distillation (OPD), which samples trajectories from the student model and supervises them with a teacher at the token level, avoids relying solely on verifiable terminal…

cs.AI2026

ESTAR: Early-Stopping Token-Aware Reasoning For Efficient Inference

Junda Wang, Zhichao Yang, Dongxu Zhang +2

Large reasoning models (LRMs) achieve state-of-the-art performance by generating long chains-of-thought, but often waste computation on redundant reasoning after the correct answer…

cs.AI2026

POET: Protocol Optimization via Eligibility Tuning

Trisha Das, Katherine Kero, Dorinda Schumann +4

Eligibility criteria (EC) are essential for clinical trial design, yet drafting them remains a time-intensive and cognitively demanding task for clinicians. Existing automated appr…

cs.AI2026

Health-SCORE: Towards Scalable Rubrics for Improving Health-LLMs

Zhichao Yang, Sepehr Janghorbani, Dongxu Zhang +6

Rubrics are essential for evaluating open-ended LLM responses, especially in safety-critical domains such as healthcare. However, creating high-quality and domain-specific rubrics…

cs.CL2023

XAIQA: Explainer-Based Data Augmentation for Extractive Question Answering

Joel Stremmel, Ardavan Saeedi, Hamid Hassanzadeh +4

Extractive question answering (QA) systems can enable physicians and researchers to query medical records, a foundational capability for designing clinical studies and understandin…

cs.CL2023★ 3 cited

Surpassing GPT-4 Medical Coding with a Two-Stage Approach

Zhichao Yang, Sanjit Singh Batra, Joel Stremmel +1

Recent advances in large language models (LLMs) show potential for clinical applications, such as clinical decision support and trial recommendations. However, the GPT-4 LLM predic…

q-bio.GN2016★ 3.2k cited

An end-to-end assembly of the Aedes aegypti genome

Daisy E. Pagete

We present an end-to-end genome assembly of a female Aedes aegypti mosquito, which spreads viral diseases such as yellow fever, dengue, chikungunya, and Zika to humans. The assembl…

cs.LG2015★ 5 cited

Feature Selection for classification of hyperspectral data by minimizing a tight bound on the VC dimension

Phool Preet, Sanjit Singh Batra, Jayadeva

Hyperspectral data consists of large number of features which require sophisticated analysis to be extracted. A popular approach to reduce computational cost, facilitate informatio…

cs.LG2015★ 3 cited

Learning a Fuzzy Hyperplane Fat Margin Classifier with Minimum VC dimension

Jayadeva, Sanjit Singh Batra, Siddarth Sabharwal

The Vapnik-Chervonenkis (VC) dimension measures the complexity of a learning machine, and a low VC dimension leads to good generalization. The recently proposed Minimal Complexity…

cs.LG2014★ 4 cited

Feature Selection through Minimization of the VC dimension

Jayadeva, Sanjit S. Batra, Siddharth Sabharwal

Feature selection involes identifying the most relevant subset of input features, with a view to improving generalization of predictive models by reducing overfitting. Directly sea…

cs.LG2014★ 14 cited

Learning a hyperplane regressor by minimizing an exact bound on the VC dimension

Jayadeva, Suresh Chandra, Siddarth Sabharwal +1

The capacity of a learning machine is measured by its Vapnik-Chervonenkis dimension, and learning machines with a low VC dimension generalize better. It is well known that the VC d…