activity
20082026
most citedUniversal relation between instantaneous diffusivity and radius of gyration of proteins in aqueous solution

153 citations · 1.3k across the 54 of their papers we have counts for

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Showing 2023Show all

5 papers · 1 filter

cond-mat.stat-mech2023

Statistics of the number of renewals, occupation times and correlation in ordinary, equilibrium and aging alternating renewal processes

Takuma Akimoto

Renewal process is a point process where an inter-event time between successive renewals is an independent and identically distributed random variable. Alternating renewal process…

cond-mat.soft2023

Estimating relaxation times from a single trajectory

Takuma Akimoto, Eiji Yamamoto, Takashi Uneyama

Complex systems such as protein conformational fluctuations and supercooled liquids exhibit a long relaxation time and are considered to posses multiple relaxation times. We analyt…

cond-mat.stat-mech2023

Non-Markovian effects of conformational fluctuations on the global diffusivity in Langevin equation with fluctuating diffusivity

Mutsumi Kimura, Takuma Akimoto

Local diffusivity of a protein depends crucially on the conformation, and the conformational fluctuations are often non-Markovian. Here, we investigate the Langevin equation with n…

cond-mat.soft2023★ 16 cited

Heterogeneous biological membranes regulate protein partitioning via fluctuating diffusivity

Ken Sakamoto, Takuma Akimoto, Mayu Muramatsu +3

Cell membranes phase separate into ordered and disordered domains depending on their compositions. This membrane compartmentalization is heterogeneous and r…

cond-mat.stat-mech2023★ 6 cited

Sample-to-sample fluctuations of transport coefficients in the totally asymmetric simple exclusion process with quenched disorder

Issei Sakai, Takuma Akimoto

We consider the totally asymmetric simple exclusion processes on quenched random energy landscapes. We show that the current and the diffusion coefficient differ from those for hom…