3 papers
q-bio.OT2025
Contributions of the Petabyte Scale Sequence Search Codeathon toward efforts to scale sequence-based searches on SRA
Priyanka Ghosh, Kjiersten Fagnan, Ryan Connor +35
The volume of biological data being generated by the scientific community is growing exponentially, reflecting technological advances and research activities. The National Institut…
cs.LG2024
The Artificial Intelligence Ontology: LLM-assisted construction of AI concept hierarchies
Marcin P. Joachimiak, Mark A. Miller, J. Harry Caufield +5
The Artificial Intelligence Ontology (AIO) is a systematization of artificial intelligence (AI) concepts, methodologies, and their interrelations. Developed via manual curation, wi…
quant-ph2023
Efficient Quantum Counting and Quantum Content-Addressable Memory for DNA similarity
Jan Balewski, Daan Camps, Katherine Klymko +1
We present QCAM, a quantum analogue of Content-Addressable Memory (CAM), useful for finding matches in two sequences of bit-strings. Our QCAM implementation takes advantage of Grov…