activity
20082026
most citedAnalytical distributions for stochastic gene expression

943 citations · 1.2k across the 6 of their papers we have counts for

collaborators

6 papers

math.NA2026

Ordered Diffusion Kernels

Jack H. Soulsby, Andreas C. S. Jørgensen, Atiyo Ghosh +1

We introduce Ordered Diffusion Kernels (ODKs), a novel class of local kernels that can approximate the infinitesimal generator of an arbitrary Itô Stochastic Differential Equation…

q-bio.QM2022

Data-driven spatio-temporal modelling of glioblastoma

Andreas Christ Sølvsten Jørgensen, Ciaran Scott Hill, Marc Sturrock +7

Mathematical oncology provides unique and invaluable insights into tumour growth on both the microscopic and macroscopic levels. This review presents state-of-the-art modelling tec…

cs.LG2021

S-multi-SNE: Semi-Supervised Classification and Visualisation of Multi-View Data

Theodoulos Rodosthenous, Vahid Shahrezaei, Marina Evangelou

An increasing number of multi-view data are being published by studies in several fields. This type of data corresponds to multiple data-views, each representing a different aspect…

stat.ML2021★ 2 cited

Multi-view Data Visualisation via Manifold Learning

Theodoulos Rodosthenous, Vahid Shahrezaei, Marina Evangelou

Non-linear dimensionality reduction can be performed by \textit{manifold learning} approaches, such as Stochastic Neighbour Embedding (SNE), Locally Linear Embedding (LLE) and Isom…

q-bio.MN2008★ 943 cited

Analytical distributions for stochastic gene expression

Vahid Shahrezaei, Peter S. Swain

Gene expression is significantly stochastic making modeling of genetic networks challenging. We present an approximation that allows the calculation of not only the mean and varian…

q-bio.MN2008★ 275 cited

Colored extrinsic fluctuations and stochastic gene expression

Vahid Shahrezaei, Julien F Ollivier, Peter S Swain

Stochasticity is both exploited and controlled by cells. Although the intrinsic stochasticity inherent in biochemistry is relatively well understood, cellular variation, or 'noise'…