4 papers
Multimodal Outer Arithmetic Block Dual Fusion of Whole Slide Images and Omics Data for Precision Oncology
Omnia Alwazzan, Amaya Gallagher-Syed, Thomas O. Millner +4
The integration of DNA methylation data with a Whole Slide Image (WSI) offers significant potential for enhancing the diagnostic precision of central nervous system (CNS) tumor cla…
Going Beyond H&E and Oncology: How Do Histopathology Foundation Models Perform for Multi-stain IHC and Immunology?
Amaya Gallagher-Syed, Elena Pontarini, Myles J. Lewis +2
This study evaluates the generalisation capabilities of state-of-the-art histopathology foundation models on out-of-distribution multi-stain autoimmune Immunohistochemistry dataset…
MUSTANG: Multi-Stain Self-Attention Graph Multiple Instance Learning Pipeline for Histopathology Whole Slide Images
Amaya Gallagher-Syed, Luca Rossi, Felice Rivellese +4
Whole Slide Images (WSIs) present a challenging computer vision task due to their gigapixel size and presence of numerous artefacts. Yet they are a valuable resource for patient di…
Automated segmentation of rheumatoid arthritis immunohistochemistry stained synovial tissue
Amaya Gallagher-Syed, Abbas Khan, Felice Rivellese +4
Rheumatoid Arthritis (RA) is a chronic, autoimmune disease which primarily affects the joint's synovial tissue. It is a highly heterogeneous disease, with wide cellular and molecul…