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q-bio.QM2009★ 27 cited
On subset seeds for protein alignment
Mikhail A. Roytberg, Anna Gambin, Laurent Noé +4
We apply the concept of subset seeds proposed in [1] to similarity search in protein sequences. The main question studied is the design of efficient seed alphabets to construct see…
q-bio.QM2008
Efficient seeding techniques for protein similarity search
Mihkail Roytberg, Anna Gambin, Laurent Noé +4
We apply the concept of subset seeds proposed in [1] to similarity search in protein sequences. The main question studied is the design of efficient seed alphabets to construct see…