3 papers
q-bio.GN2026
DiSTILL: A Hybrid Cloud-HPC Workflow System for Reproducible Spatial Transcriptomics Analysis
Myles Joshua Toledo Tan, Vasco Gerardo Hinostroza Fuentes, Nikhil Yerra +4
Spatial transcriptomics workflows increasingly combine large annotated data objects, notebook-based analyses, and resource-intensive statistical models that must be executed on hig…
q-bio.GN2026
Engineering Spatial and Molecular Features from Cellular Niches to Inform Predictions of Inflammatory Bowel Disease
Myles Joshua Toledo Tan, Maria Kapetanaki, Panayiotis V. Benos
Differentiating between the two main subtypes of Inflammatory Bowel Disease (IBD): Crohns disease (CD) and ulcerative colitis (UC) is a persistent clinical challenge due to overlap…
eess.IV2025
Comparing Baseline and Day-1 Diffusion MRI Using Multimodal Deep Embeddings for Stroke Outcome Prediction
Sina Raeisadigh, Myles Joshua Toledo Tan, Henning Müller +1
This study compares baseline (J0) and 24-hour (J1) diffusion magnetic resonance imaging (MRI) for predicting three-month functional outcomes after acute ischemic stroke (AIS). Seve…