19 citations · 33 across the 10 of their papers we have counts for
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cs.LG2025★ 1 cited
Large Language Model is Secretly a Protein Sequence Optimizer
Yinkai Wang, Jiaxing He, Yuanqi Du +5
We consider the protein sequence engineering problem, which aims to find protein sequences with high fitness levels, starting from a given wild-type sequence. Directed evolution ha…
cs.LG2025★ 3 cited
MADGEN: Mass-Spec attends to De Novo Molecular generation
Yinkai Wang, Xiaohui Chen, Liping Liu +1
The annotation (assigning structural chemical identities) of MS/MS spectra remains a significant challenge due to the enormous molecular diversity in biological samples and the lim…
cs.LG2025★ 1 cited
Graph Generative Pre-trained Transformer
Xiaohui Chen, Yinkai Wang, Jiaxing He +4
Graph generation is a critical task in numerous domains, including molecular design and social network analysis, due to its ability to model complex relationships and structured da…