2 papers
q-bio.BM2025
Methods for Analyzing RNA Pseudoknots via Chord Diagrams and Intersection Graphs
Rayan Ibrahim, Allison H. Moore
RNA molecules are known to form complex secondary structures including pseudoknots. A systematic framework for the enumeration, classification and prediction of secondary structure…
math.GT2022
Determinants of Simple Theta Curves and Symmetric Graphs
Matthew Elpers, Rayan Ibrahim, Allison H. Moore
A theta curve is a spatial embedding of the -graph in the three-sphere, taken up to ambient isotopy. We define the determinant of a theta curve as an integer-valued invariant ar…