6 citations · 6 across the 14 of their papers we have counts for
3 papers · 1 filter
ProtScape: A molecular structure and energy-aware representation for protein conformation generation
Siddharth Viswanath, Dhananjay Bhaskar, Xingzhi Sun +13
Molecular dynamics (MD) simulations are a principled but computationally expensive approach for studying protein conformational variability, making it challenging to generate large…
Convergence of Manifold Filter-Combine Networks
David R. Johnson, Joyce Chew, Siddharth Viswanath +4
In order to better understand manifold neural networks (MNNs), we introduce Manifold Filter-Combine Networks (MFCNs). The filter-combine framework parallels the popular aggregate-c…
Hyperedge Representations with Hypergraph Wavelets: Applications to Spatial Transcriptomics
Xingzhi Sun, Charles Xu, João F. Rocha +6
In many data-driven applications, higher-order relationships among multiple objects are essential in capturing complex interactions. Hypergraphs, which generalize graphs by allowin…