48 citations · 288 across the 47 of their papers we have counts for
15 papers · 1 filter
Progressive Multi-Modality Learning for Inverse Protein Folding
Jiangbin Zheng, Stan Z. Li
While deep generative models show promise for learning inverse protein folding directly from data, the lack of publicly available structure-sequence pairings limits their generaliz…
Boosting the Power of Small Multimodal Reasoning Models to Match Larger Models with Self-Consistency Training
Cheng Tan, Jingxuan Wei, Zhangyang Gao +5
Multimodal reasoning is a challenging task that requires models to reason across multiple modalities to answer questions. Existing approaches have made progress by incorporating la…
Protein 3D Graph Structure Learning for Robust Structure-based Protein Property Prediction
Yufei Huang, Siyuan Li, Jin Su +9
Protein structure-based property prediction has emerged as a promising approach for various biological tasks, such as protein function prediction and sub-cellular location estimati…
USTEP: Spatio-Temporal Predictive Learning under A Unified View
Cheng Tan, Jue Wang, Zhangyang Gao +2
Spatio-temporal predictive learning plays a crucial role in self-supervised learning, with wide-ranging applications across a diverse range of fields. Previous approaches for tempo…
SemiReward: A General Reward Model for Semi-supervised Learning
Siyuan Li, Weiyang Jin, Zedong Wang +4
Semi-supervised learning (SSL) has witnessed great progress with various improvements in the self-training framework with pseudo labeling. The main challenge is how to distinguish…
Enhancing Human-like Multi-Modal Reasoning: A New Challenging Dataset and Comprehensive Framework
Jingxuan Wei, Cheng Tan, Zhangyang Gao +5
Multimodal reasoning is a critical component in the pursuit of artificial intelligence systems that exhibit human-like intelligence, especially when tackling complex tasks. While t…
Functional-Group-Based Diffusion for Pocket-Specific Molecule Generation and Elaboration
Haitao Lin, Yufei Huang, Odin Zhang +4
In recent years, AI-assisted drug design methods have been proposed to generate molecules given the pockets' structures of target proteins. Most of them are atom-level-based method…
OpenSTL: A Comprehensive Benchmark of Spatio-Temporal Predictive Learning
Cheng Tan, Siyuan Li, Zhangyang Gao +5
Spatio-temporal predictive learning is a learning paradigm that enables models to learn spatial and temporal patterns by predicting future frames from given past frames in an unsup…
Behavior Contrastive Learning for Unsupervised Skill Discovery
Rushuai Yang, Chenjia Bai, Hongyi Guo +5
In reinforcement learning, unsupervised skill discovery aims to learn diverse skills without extrinsic rewards. Previous methods discover skills by maximizing the mutual informatio…
InstructUIE: Multi-task Instruction Tuning for Unified Information Extraction
Xiao Wang, Weikang Zhou, Can Zu +11
Large language models have unlocked strong multi-task capabilities from reading instructive prompts. However, recent studies have shown that existing large models still have diffic…
CVT-SLR: Contrastive Visual-Textual Transformation for Sign Language Recognition with Variational Alignment
Jiangbin Zheng, Yile Wang, Cheng Tan +5
Sign language recognition (SLR) is a weakly supervised task that annotates sign videos as textual glosses. Recent studies show that insufficient training caused by the lack of larg…
Instructor-inspired Machine Learning for Robust Molecular Property Prediction
Fang Wu, Shuting Jin, Siyuan Li +1
Machine learning catalyzes a revolution in chemical and biological science. However, its efficacy heavily depends on the availability of labeled data, and annotating biochemical da…
CCPL: Cross-modal Contrastive Protein Learning
Jiangbin Zheng, Stan Z. Li
Effective protein representation learning is crucial for predicting protein functions. Traditional methods often pretrain protein language models on large, unlabeled amino acid seq…
RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design
Cheng Tan, Yijie Zhang, Zhangyang Gao +4
While artificial intelligence has made remarkable strides in revealing the relationship between biological macromolecules' primary sequence and tertiary structure, designing RNA se…
Rethinking Explaining Graph Neural Networks via Non-parametric Subgraph Matching
Fang Wu, Siyuan Li, Xurui Jin +4
The success of graph neural networks (GNNs) provokes the question about explainability: ``Which fraction of the input graph is the most determinant of the prediction?'' Particularl…