1 citations · 2 across the 3 of their papers we have counts for
3 papers
scSSL-Bench: Benchmarking Self-Supervised Learning for Single-Cell Data
Olga Ovcharenko, Florian Barkmann, Philip Toma +4
Self-supervised learning (SSL) has proven to be a powerful approach for extracting biologically meaningful representations from single-cell data. To advance our understanding of SS…
scTree: Discovering Cellular Hierarchies in the Presence of Batch Effects in scRNA-seq Data
Moritz Vandenhirtz, Florian Barkmann, Laura Manduchi +2
We propose a novel method, scTree, for single-cell Tree Variational Autoencoders, extending a hierarchical clustering approach to single-cell RNA sequencing data. scTree corrects f…
Superiorization as a novel strategy for linearly constrained inverse radiotherapy treatment planning
Florian Barkmann, Yair Censor, Niklas Wahl
We apply the superiorization methodology to the intensity-modulated radiation therapy (IMRT) treatment planning problem. In superiorization, linear voxel dose inequality constraint…