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physics.bio-ph2024
Target search on networks-within-networks with applications to protein-DNA interactions
Lucas Hedström, Seong-Gyu Yang, Ludvig Lizana
We present a novel framework for understanding node target search in systems organized as hierarchical networks-within-networks. Our work generalizes traditional search models on c…
physics.bio-ph2024
Identifying stable communities in Hi-C data using a multifractal null model
Lucas Hedström, Antón Carcedo MartÃnez, Ludvig Lizana
Chromosome capture techniques like Hi-C have expanded our understanding of mammalian genome 3D architecture and how it influences gene activity. To analyze Hi-C data sets, research…