3 papers
cs.CL2023
Principles from Clinical Research for NLP Model Generalization
Aparna Elangovan, Jiayuan He, Yuan Li +1
The NLP community typically relies on performance of a model on a held-out test set to assess generalization. Performance drops observed in datasets outside of official test sets a…
cs.AI2023
Effects of Human Adversarial and Affable Samples on BERT Generalization
Aparna Elangovan, Jiayuan He, Yuan Li +1
BERT-based models have had strong performance on leaderboards, yet have been demonstrably worse in real-world settings requiring generalization. Limited quantities of training data…
cs.LG2022
Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT
Aparna Elangovan, Yuan Li, Douglas E. V. Pires +2
Protein-protein interactions (PPIs) are critical to normal cellular function and are related to many disease pathways. However, only 4% of PPIs are annotated with PTMs in biologica…