activity
20222025
most citedEndowing Protein Language Models with Structural Knowledge

13 citations · 24 across the 6 of their papers we have counts for

collaborators

6 papers

cs.LG2025

The Flood Complex: Large-Scale Persistent Homology on Millions of Points

Florian Graf, Paolo Pellizzoni, Martin Uray +2

We consider the problem of computing persistent homology (PH) for large-scale Euclidean point cloud data, aimed at downstream machine learning tasks, where the exponential growth o…

q-bio.QM2024★ 13 cited

Endowing Protein Language Models with Structural Knowledge

Dexiong Chen, Philip Hartout, Paolo Pellizzoni +2

Understanding the relationships between protein sequence, structure and function is a long-standing biological challenge with manifold implications from drug design to our understa…

stat.ML2023

Fisher Information Embedding for Node and Graph Learning

Dexiong Chen, Paolo Pellizzoni, Karsten Borgwardt

Attention-based graph neural networks (GNNs), such as graph attention networks (GATs), have become popular neural architectures for processing graph-structured data and learning no…

cs.DS2023★ 4 cited

Fully dynamic clustering and diversity maximization in doubling metrics

Paolo Pellizzoni, Andrea Pietracaprina, Geppino Pucci

We present approximation algorithms for some variants of center-based clustering and related problems in the fully dynamic setting, where the pointset evolves through an arbitrary…

cs.DS2022

Dimensionality Reduction on Complex Vector Spaces for Euclidean Distance with Dynamic Weights

Simone Moretti, Paolo Pellizzoni, Francesco Silvestri

The weighted Euclidean norm of a vector with weights is the Euclidean norm where the contribution of each dimension is scaled by a…

cs.LG2022★ 7 cited

k-Center Clustering with Outliers in Sliding Windows

Paolo Pellizzoni, Andrea Pietracaprina, Geppino Pucci

Metric -center clustering is a fundamental unsupervised learning primitive. Although widely used, this primitive is heavily affected by noise in the data, so that a more sensibl…