3 papers
q-bio.PE2024
Sources of HIV infections among MSM with a migration background: a viral phylogenetic case study in Amsterdam, the Netherlands
Alexandra Blenkinsop, Nikos Pantazis, Evangelia Georgia Kostaki +8
Background: Men and women with a migration background comprise an increasing proportion of incident HIV cases across Western Europe. Several studies indicate a substantial proporti…
q-bio.PE2023
Bayesian mixture models for phylogenetic source attribution from consensus sequences and time since infection estimates
Alexandra Blenkinsop, Lysandros Sofocleous, Francesco Di Lauro +8
In stopping the spread of infectious diseases, pathogen genomic data can be used to reconstruct transmission events and characterize population-level sources of infection. Most app…
q-bio.PE2022
Estimating the potential to prevent locally acquired HIV infections in a UNAIDS Fast-Track City, Amsterdam
Alexandra Blenkinsop, Mélodie Monod, Ard van Sighem +9
Amsterdam and other UNAIDS Fast-Track cities aim for zero new HIV infections. Utilising molecular and clinical data of the ATHENA observational HIV cohort, our primary aims are to…