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20212024
most citedBayesian mixture models for phylogenetic source attribution from consensus sequences and time since infection estimates

1 citations · 1 across the 4 of their papers we have counts for

collaborators

4 papers

q-bio.PE2024

Sources of HIV infections among MSM with a migration background: a viral phylogenetic case study in Amsterdam, the Netherlands

Alexandra Blenkinsop, Nikos Pantazis, Evangelia Georgia Kostaki +8

Background: Men and women with a migration background comprise an increasing proportion of incident HIV cases across Western Europe. Several studies indicate a substantial proporti…

q-bio.PE2023★ 1 cited

Bayesian mixture models for phylogenetic source attribution from consensus sequences and time since infection estimates

Alexandra Blenkinsop, Lysandros Sofocleous, Francesco Di Lauro +8

In stopping the spread of infectious diseases, pathogen genomic data can be used to reconstruct transmission events and characterize population-level sources of infection. Most app…

q-bio.PE2022

Estimating the potential to prevent locally acquired HIV infections in a UNAIDS Fast-Track City, Amsterdam

Alexandra Blenkinsop, Mélodie Monod, Ard van Sighem +9

Amsterdam and other UNAIDS Fast-Track cities aim for zero new HIV infections. Utilising molecular and clinical data of the ATHENA observational HIV cohort, our primary aims are to…

stat.AP2021

Regularised B-splines projected Gaussian Process priors to estimate time-trends of age-specific COVID-19 deaths related to vaccine roll-out

Mélodie Monod, Alexandra Blenkinsop, Andrea Brizzi +7

The COVID-19 pandemic has caused severe public health consequences in the United States. In this study, we use a hierarchical Bayesian model to estimate the age-specific COVID-19 a…