4 papers
Stencil-Lifting: Hierarchical Recursive Lifting System for Extracting Summary of Stencil Kernel in Legacy Codes
Mingyi Li, Junmin Xiao, Siyan Chen +5
We introduce Stencil-Lifting, a novel system for automatically converting stencil kernels written in low-level languages in legacy code into semantically equivalent Domain-Specific…
FastDup: a scalable duplicate marking tool using speculation-and-test mechanism
Zhonghai Zhang, Yewen Li, Ke Meng +2
Duplicate marking is a critical preprocessing step in gene sequence analysis to flag redundant reads arising from polymerase chain reaction(PCR) amplification and sequencing artifa…
TSUE: A Two-Stage Data Update Method for an Erasure Coded Cluster File System
Zheng Wei, Jing Xing, Yida Gu +4
Compared to replication-based storage systems, erasure-coded storage incurs significantly higher overhead during data updates. To address this issue, various parity logging methods…
Scaling Neural-Network-Based Molecular Dynamics with Long-Range Electrostatic Interactions to 51 Nanoseconds per Day
Jianxiong Li, Beining Zhang, Mingzhen Li +7
Neural network-based molecular dynamics (NNMD) simulations incorporating long-range electrostatic interactions have significantly extended the applicability to heterogeneous and io…