activity
20242026
collaborators

6 papers

cs.LG2026

Multipath Adaptive Gated Bottleneck Latent ODE with Raman Data Fusion for Cell Culture Process Forecasting

Johnny Peng, Thanh Tung Khuat, Ellen Otte +2

Mammalian cell-culture processes underpin the manufacture of many biopharmaceuticals, yet keeping a run on track is hard: critical process parameters drift over days, and an off-sp…

q-bio.QM2025

Learning From Limited Data and Feedback for Cell Culture Process Monitoring: A Comparative Study

Johnny Peng, Thanh Tung Khuat, Ellen Otte +2

In cell culture bioprocessing, real-time batch process monitoring (BPM) refers to the continuous tracking and analysis of key process variables such as viable cell density, nutrien…

q-bio.QM2025

Lessons Learned from Deploying Adaptive Machine Learning Agents with Limited Data for Real-time Cell Culture Process Monitoring

Thanh Tung Khuat, Johnny Peng, Robert Bassett +2

This study explores the deployment of three machine learning (ML) approaches for real-time prediction of glucose, lactate, and ammonium concentrations in cell culture processes, us…

cs.LG2025

Machine Learning Methods for Small Data and Upstream Bioprocessing Applications: A Comprehensive Review

Johnny Peng, Thanh Tung Khuat, Katarzyna Musial +1

Data is crucial for machine learning (ML) applications, yet acquiring large datasets can be costly and time-consuming, especially in complex, resource-intensive fields like biophar…

cs.LG2024

Hyperbox Mixture Regression for Process Performance Prediction in Antibody Production

Ali Nik-Khorasani, Thanh Tung Khuat, Bogdan Gabrys

This paper addresses the challenges of predicting bioprocess performance, particularly in monoclonal antibody (mAb) production, where conventional statistical methods often fall sh…

q-bio.QM2024

Uncertainty Quantification Using Ensemble Learning and Monte Carlo Sampling for Performance Prediction and Monitoring in Cell Culture Processes

Thanh Tung Khuat, Robert Bassett, Ellen Otte +1

Biopharmaceutical products, particularly monoclonal antibodies (mAbs), have gained prominence in the pharmaceutical market due to their high specificity and efficacy. As these prod…