37 citations · 74 across the 7 of their papers we have counts for
3 papers · 1 filter
BioVERSE: Representation Alignment of Biomedical Modalities to LLMs for Multi-Modal Reasoning
Ching-Huei Tsou, Michal Ozery-Flato, Ella Barkan +2
Recent advances in large language models (LLMs) and biomedical foundation models (BioFMs) have achieved strong results in biological text reasoning, molecular modeling, and single-…
BMFM-DNA: A SNP-aware DNA foundation model to capture variant effects
Hongyang Li, Sanjoy Dey, Bum Chul Kwon +7
Large language models (LLMs) trained on text demonstrated remarkable results on natural language processing (NLP) tasks. These models have been adapted to decipher the language of…
BMFM-RNA: whole-cell expression decoding improves transcriptomic foundation models
Michael M. Danziger, Bharath Dandala, Viatcheslav Gurev +12
Transcriptomic foundation models pretrained with masked language modeling can achieve low pretraining loss yet produce poor cell representations for downstream tasks. We introduce…