8 papers
Spin-Weighted Spherical Harmonics Enable Complete and Scalable -Equivariant Networks
Chenxing Liang, Yuchao Lin, Andrii Kryvenko +5
-equivariant networks are promising for 3D atomistic system modeling, yet their scalability is limited by the complexity of the Clebsch-Gordan Tensor Produc…
Iterative Distillation for Reward-Guided Fine-Tuning of Diffusion Models in Biomolecular Design
Xingyu Su, Xiner Li, Masatoshi Uehara +7
We address the problem of fine-tuning diffusion models for reward-guided generation in biomolecular design. While diffusion models have proven highly effective in modeling complex,…
Augmenting Molecular Graphs with Geometries via Machine Learning Interatomic Potentials
Cong Fu, Yuchao Lin, Zachary Krueger +6
Accurate molecular property predictions require 3D geometries, which are typically obtained using expensive methods such as density functional theory (DFT). Here, we attempt to obt…
Tensor Decomposition Networks for Fast Machine Learning Interatomic Potential Computations
Yuchao Lin, Cong Fu, Zachary Krueger +6
-equivariant networks are the dominant models for machine learning interatomic potentials (MLIPs). The key operation of such networks is the Clebsch-Gordan (CG) tensor…
Language Models for Controllable DNA Sequence Design
Xingyu Su, Xiner Li, Yuchao Lin +3
We consider controllable DNA sequence design, where sequences are generated by conditioning on specific biological properties. While language models (LMs) such as GPT and BERT have…
A Benchmark for Quantum Chemistry Relaxations via Machine Learning Interatomic Potentials
Cong Fu, Yuchao Lin, Zachary Krueger +8
Computational quantum chemistry plays a critical role in drug discovery, chemical synthesis, and materials science. While first-principles methods, such as density functional theor…