activity
20212025
most citedChemRL-GEM: Geometry Enhanced Molecular Representation Learning for Property Prediction

616 citations · 688 across the 6 of their papers we have counts for

collaborators

6 papers

q-bio.BM2025

HelixVS: Deep Learning-Enhanced Structure-Based Platform for Screening and Design

Shanzhuo Zhang, Xianbin Ye, Donglong He +3

Drug discovery through virtual screening (VS) has become a popular strategy for identifying hits against protein targets. Alongside VS, molecular design further expands accessible…

cs.LG2023★ 6 cited

Pre-Training on Large-Scale Generated Docking Conformations with HelixDock to Unlock the Potential of Protein-ligand Structure Prediction Models

Lihang Liu, Shanzhuo Zhang, Donglong He +12

Protein-ligand structure prediction is an essential task in drug discovery, predicting the binding interactions between small molecules (ligands) and target proteins (receptors). R…

cs.LG2022★ 3 cited

GEM-2: Next Generation Molecular Property Prediction Network by Modeling Full-range Many-body Interactions

Lihang Liu, Donglong He, Xiaomin Fang +4

Molecular property prediction is a fundamental task in the drug and material industries. Physically, the properties of a molecule are determined by its own electronic structure, wh…

q-bio.BM2022★ 62 cited

HelixADMET: a robust and endpoint extensible ADMET system incorporating self-supervised knowledge transfer

Shanzhuo Zhang, Zhiyuan Yan, Yueyang Huang +8

Accurate ADMET (an abbreviation for "absorption, distribution, metabolism, excretion, and toxicity") predictions can efficiently screen out undesirable drug candidates in the early…

physics.chem-ph2021★ 1 cited

LiteGEM: Lite Geometry Enhanced Molecular Representation Learning for Quantum Property Prediction

Shanzhuo Zhang, Lihang Liu, Sheng Gao +6

In this report, we (SuperHelix team) present our solution to KDD Cup 2021-PCQM4M-LSC, a large-scale quantum chemistry dataset on predicting HOMO-LUMO gap of molecules. Our solution…

cs.LG2021★ 616 cited

ChemRL-GEM: Geometry Enhanced Molecular Representation Learning for Property Prediction

Xiaomin Fang, Lihang Liu, Jieqiong Lei +6

Effective molecular representation learning is of great importance to facilitate molecular property prediction, which is a fundamental task for the drug and material industry. Rece…