activity
20202023
most citedSelf Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation

9 citations · 15 across the 7 of their papers we have counts for

collaborators

7 papers

cs.CV2023

Token Sparsification for Faster Medical Image Segmentation

Lei Zhou, Huidong Liu, Joseph Bae +3

Can we use sparse tokens for dense prediction, e.g., segmentation? Although token sparsification has been applied to Vision Transformers (ViT) to accelerate classification, it is s…

cs.CV2023

Enhancing Modality-Agnostic Representations via Meta-Learning for Brain Tumor Segmentation

Aishik Konwer, Xiaoling Hu, Joseph Bae +3

In medical vision, different imaging modalities provide complementary information. However, in practice, not all modalities may be available during inference or even training. Prev…

eess.IV2022★ 4 cited

Temporal Context Matters: Enhancing Single Image Prediction with Disease Progression Representations

Aishik Konwer, Xuan Xu, Joseph Bae +2

Clinical outcome or severity prediction from medical images has largely focused on learning representations from single-timepoint or snapshot scans. It has been shown that disease…

eess.IV2022★ 9 cited

Self Pre-training with Masked Autoencoders for Medical Image Classification and Segmentation

Lei Zhou, Huidong Liu, Joseph Bae +3

Masked Autoencoder (MAE) has recently been shown to be effective in pre-training Vision Transformers (ViT) for natural image analysis. By reconstructing full images from partially…

eess.IV2022★ 2 cited

Lung Swapping Autoencoder: Learning a Disentangled Structure-texture Representation of Chest Radiographs

Lei Zhou, Joseph Bae, Huidong Liu +5

Well-labeled datasets of chest radiographs (CXRs) are difficult to acquire due to the high cost of annotation. Thus, it is desirable to learn a robust and transferable representati…

eess.IV2021

Attention-based Multi-scale Gated Recurrent Encoder with Novel Correlation Loss for COVID-19 Progression Prediction

Aishik Konwer, Joseph Bae, Gagandeep Singh +5

COVID-19 image analysis has mostly focused on diagnostic tasks using single timepoint scans acquired upon disease presentation or admission. We present a deep learning-based approa…

q-bio.QM2020

Predicting Clinical Outcomes in COVID-19 using Radiomics and Deep Learning on Chest Radiographs: A Multi-Institutional Study

Joseph Bae, Saarthak Kapse, Gagandeep Singh +10

We predict mechanical ventilation requirement and mortality using computational modeling of chest radiographs (CXRs) for coronavirus disease 2019 (COVID-19) patients. This two-cent…